I have received my raw data on a hard drive. In the “clean_data” folder there are 4-files:

1.]  (ID)_SA_L001_R1_001.fastq.gz   57.58GB

2.]  (ID)_SA_L001_R2_001.fastq.gz   59.17GB

3.]  (ID)_SU_L001_R1_001.fastq.gz   18.73GB

4.]  (ID)_SU_L001_R2_001.fastq.gz   18.73GB

The first two files (1&2) are compressed fastq files. It turns out that the other two files (3&4), however, are not really compressed files, they are just normal uncompressed fastq files. What is the data on the uncompressed files (3&4)? How does it relate to the data on the compressed files (1&2)?

Thanks for your help,



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